PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028088112.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 514aa MW: 58484.9 Da PI: 6.1433

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028088112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.3e-18	157	247	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v+ ++ lp kf+++h g++ t++ledesg++++ k+ s + l++GW++F+k ++L egD vvF+l+++ +f + XP_028088112.1 157 FVKLMLRSHVTYCFWMGLPSKFCKSHlpGHD----ETVVLEDESGEEYKTKF--LAVS--HGLSGGWRGFAKVKKLLEGDAVVFHLVRSCKF--K 241 89**********************75444....58***********..5555..55***********************98888..8 PP EEEE-S CS B3 94 vkvfrk 99 v+++r+ XP_028088112.1 242 VHIVRA 247 888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MEKPSLSPNS ISKTCSLSKP SSSSFYVHTD NLPLLREKGN LANSVSMDDD AQQHNLTFTE 60 THTMKEKPQQ FTSLDEADPT VEEERPSAAK KWRIGIKNRF ATKQVRIVSD DPRKSECRKR 120 KRGIMDDLYD HFEAKSSLVM KRAEEVQASL SPEFPSFVKL MLRSHVTYCF WMGLPSKFCK 180 SHLPGHDETV VLEDESGEEY KTKFLAVSHG LSGGWRGFAK VKKLLEGDAV VFHLVRSCKF 240 KVHIVRANDL AIVDRAPEPV YFDARAEETD FAYAEKNSRT CEKAEENHSR LVPPNILGEN 300 PRPVTDQSES ETDQSENDTE NLYSSDMEGY GLSGSIADFN NFNIIVNGLP IDHTLSQHTR 360 TKYYDLCCTQ KSYLHNHLLK SVDTKLAAEI VSKTITIADS IRASKLSSTS EDDFAIWDKT 420 LEAFEMLGMD VGFLRARLNR LVRIASELTV AADSKRYDEA KVERDRVEVE MRSLELRLLE 480 LKQARSRLDY EMEGLNEKVT RYEVMFQGVA NGFW

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MEKPSLSPNS ISKTCSLSKP SSSSFYVHTD NLPLLREKGN LANSVSMDDD AQQHNLTFTE  60
THTMKEKPQQ FTSLDEADPT VEEERPSAAK KWRIGIKNRF ATKQVRIVSD DPRKSECRKR  120
KRGIMDDLYD HFEAKSSLVM KRAEEVQASL SPEFPSFVKL MLRSHVTYCF WMGLPSKFCK  180
SHLPGHDETV VLEDESGEEY KTKFLAVSHG LSGGWRGFAK VKKLLEGDAV VFHLVRSCKF  240
KVHIVRANDL AIVDRAPEPV YFDARAEETD FAYAEKNSRT CEKAEENHSR LVPPNILGEN  300
PRPVTDQSES ETDQSENDTE NLYSSDMEGY GLSGSIADFN NFNIIVNGLP IDHTLSQHTR  360
TKYYDLCCTQ KSYLHNHLLK SVDTKLAAEI VSKTITIADS IRASKLSSTS EDDFAIWDKT  420
LEAFEMLGMD VGFLRARLNR LVRIASELTV AADSKRYDEA KVERDRVEVE MRSLELRLLE  480
LKQARSRLDY EMEGLNEKVT RYEVMFQGVA NGFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-38	B3 family protein