PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087517.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 281aa    MW: 31831.2 Da    PI: 4.8343
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding482.8e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv  +   G  +W+++++  g++R++k+c++rw +yl
   XP_028087517.1 14 KGPWTAEEDAKLVSFILTNGHCCWRAVPKLAGLRRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding52.79.5e-1771111547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +eE++l +d++++lG++ W++Ia+ ++ gRt++++k++w+++
   XP_028087517.1  71 NEEEEKLVIDLHARLGNR-WSKIASSLP-GRTDNEIKNHWNTH 111
                      58****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGRKPCCDKF VVKKGPWTAE EDAKLVSFIL TNGHCCWRAV PKLAGLRRCG KSCRLRWTNY  60
LRPDLKRGLL NEEEEKLVID LHARLGNRWS KIASSLPGRT DNEIKNHWNT HIKKKLIKMG  120
IDPITHEPLH QEPDPIIISQ QMPHSPSNNN NNNCLNSDNF NYSTGQESPE NANNQTTSND  180
NLTFPRKNLT GFETQKDDDD DPLMSCIQSE TFLDDAFWNF ATTSGGDQDY TAFGLSSSSS  240
SSSSSSEDCN STWLLDYNDF DFDLECFNID MSTFEVDATI N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22680.16e-87MYB family protein