PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028086098.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 376aa MW: 43067.7 Da PI: 6.3799

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028086098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_028086098.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16.5	2.5e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_028086098.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	21.7	5.4e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_028086098.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	17.8	9.5e-06	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_028086098.1 166 HICPypDCGKRYAHEYKLKNHIASH 190 679999*****************96 PP
5	zf-C2H2	12.6	0.0004	232	257	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C+k + + + L+ H+r+ H XP_028086098.1 232 YCCPyeGCDKAYIHEYKLNLHLRReH 257 7899*******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
METQINHNFF ERRPITKSKT PAVKWFKEWV PQDVVATGGK CSLFKWVTEA TLKAMKEKSN 60 EPEAAEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIASH HEKNNNVDVT KYVQVQQPPE KVSKTSKPSA SAYGSASSDR PYCCPYEGCD 240 KAYIHEYKLN LHLRREHPGH LSDENTKNTQ SAIDNDMDEG SDQDAYAGKR GNSSKMQKQS 300 KPKPNLKLPP SKVARKGSTA SPANLNLVKK AWPVKEEVYE EEEDSEETEE DRDNVEDGWR 360 YAENNEDDDE ETEYED

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

METQINHNFF ERRPITKSKT PAVKWFKEWV PQDVVATGGK CSLFKWVTEA TLKAMKEKSN  60
EPEAAEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE  180
YKLKNHIASH HEKNNNVDVT KYVQVQQPPE KVSKTSKPSA SAYGSASSDR PYCCPYEGCD  240
KAYIHEYKLN LHLRREHPGH LSDENTKNTQ SAIDNDMDEG SDQDAYAGKR GNSSKMQKQS  300
KPKPNLKLPP SKVARKGSTA SPANLNLVKK AWPVKEEVYE EEEDSEETEE DRDNVEDGWR  360
YAENNEDDDE ETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-146	C2H2 family protein