PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085713.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 272aa    MW: 29486.7 Da    PI: 5.4405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.39e-11159206455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_028085713.1 159 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 206
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MTNDGAIHSS TAAPYNLAEI WPFPINGGES GGGGLDLRRV QFGQGLGQFA EKANREVSGG  60
DDPMFLDHKG AQSGGSRKRR DVPEDESAMA VSTSSGNGMN DCDGKRIKTG GSRDEYGDSK  120
AEAEANSSKP VEQNTKPPEP PPKQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD  180
LVPGCNKVIG KALVLDEIIN YIQSLQSQVE FLSMKLEAVN SRMNPDIEGF PPKDYGQQTF  240
DAGGVAFGSQ ATKDYDRGLS PEWLHMQIGG GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-92bHLH family protein