PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028085160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SRS | ||||||||
Protein Properties | Length: 211aa MW: 23134.9 Da PI: 8.2272 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 222 | 1.2e-68 | 9 | 157 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskk 98 +++CqdCGnqakkdC h+RCRtCCksrgf C+thvkstWvpa+krrerqqq++ +++ +++ ++ + ++++++l + ++ k ++++ XP_028085160.1 9 EGMNCQDCGNQAKKDCGHMRCRTCCKSRGFPCETHVKSTWVPASKRRERQQQQQHLTAFQQHPQHPHPQQQNQQL--SLMMRGENPKRLRENPGL 101 579**************************************************9998888777766666666655..344444455555677899 PP DUF702 99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 e+++ +lP+ev+s+avfrcvrvss+dd++ee+aYqtav+igGhvfkGiLydqG+e+ XP_028085160.1 102 EVQVGHLPSEVNSPAVFRCVRVSSMDDADEEYAYQTAVNIGGHVFKGILYDQGPET 157 9*****************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MRRGGGGGEG MNCQDCGNQA KKDCGHMRCR TCCKSRGFPC ETHVKSTWVP ASKRRERQQQ 60 QQHLTAFQQH PQHPHPQQQN QQLSLMMRGE NPKRLRENPG LEVQVGHLPS EVNSPAVFRC 120 VRVSSMDDAD EEYAYQTAVN IGGHVFKGIL YDQGPETHYG GGESSSGGGG AQQLNLITAA 180 TATASNPAIT MLDPSLYPFM AGTQFFPPPR P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 8e-64 | SRS family protein |