PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028084960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 170aa MW: 19885.3 Da PI: 9.62 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 51 | 69 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 +C k F+r +L H+r H XP_028084960.1 51 ICRKGFKRVASLWMHMRAH 69 7****************99 PP | |||||||
2 | zf-C2H2 | 13.5 | 0.00021 | 134 | 157 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ ksFs +Lk+H++++ XP_028084960.1 134 YSCNCCNkKSFSVLVDLKSHLKNC 157 99********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MDAMIISEEK SVMTLKVEDE KMKDEIGSDD WEIIELDVVK LLAEHIHSYD ICRKGFKRVA 60 SLWMHMRAHG NRFKTREAVA KPERCSSEFS RRKTRFFCPF VGCNRNKSHK KFRLLKSVIC 120 VKNHFKRSHC PKMYSCNCCN KKSFSVLVDL KSHLKNCGES KWKCSCGNEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22890.1 | 2e-51 | C2H2 family protein |