PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028083686.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRF | ||||||||
Protein Properties | Length: 496aa MW: 53661.1 Da PI: 9.2406 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.3 | 7.4e-25 | 130 | 174 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++++k+C+rH+hrgr rsrk++e+ XP_028083686.1 130 DPEPGRCRRTDGKKWRCSREVVPDQKYCQRHMHRGRLRSRKHVEA 174 79*****************************************97 PP | |||||||
2 | WRC | 55.3 | 1.2e-17 | 378 | 413 | 3 | 38 |
WRC 3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsr 38 e rC+RtDGKkWRCsr+v++ +k+C Hlhrg ++ XP_028083686.1 378 ELQRCKRTDGKKWRCSRDVVPYQKYCGLHLHRGAKK 413 668*****************************9765 PP | |||||||
3 | QLQ | 43.4 | 1.1e-15 | 59 | 93 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT aQ++++ +Q l++Ky+aa++PvP +L+++i++ XP_028083686.1 59 FTSAQFHEFHQQDLIFKYIAAGLPVPFHLIFPIWR 93 *********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MEPKPSDSGK KKEWLIKIEE EEGSIAEESS PSIKLGLGIG DCCSGGESHV KPAAAALLFT 60 SAQFHEFHQQ DLIFKYIAAG LPVPFHLIFP IWRSVATSFG GSANAGIYNL YPSFIGFSPQ 120 GFPDYRSMMD PEPGRCRRTD GKKWRCSREV VPDQKYCQRH MHRGRLRSRK HVEASKIPSE 180 SCTATTLNCK NTTTTINTSD SPNMESNLLT LVPVNLQLAT PSSSRTNITS IGDINGSDNN 240 VNAEKDSTPT TASIGGINGS NNNVNAKKDS TATLTTYGRN IARNKNVYGS EGTTTTGLMS 300 ATADHNNRRR DDDCVDGNNA SYNHHNNRIN SKRSINDGHN VNAGSLPASG FGFSPKSVLQ 360 VVGCSSSCLG YKNVLETELQ RCKRTDGKKW RCSRDVVPYQ KYCGLHLHRG AKKLVSATQS 420 VTVAAAAPPI RNILAPPPLA IPKKTNGRIK LDTNLSISIA ASPRQKTDDE KSSSTSSDAT 480 TITDENGSMS HLAVSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 2e-29 | GRF family protein |