PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083067.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 288aa MW: 32933.7 Da PI: 8.8982

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	126	145	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C C+k+F+r n++ H+ XP_028083067.1 126 FACFVCSKTFNRYNNMQMHM 145 78*****************9 PP
2	zf-C2H2	12.8	0.00036	210	232	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C k+F k + ++H +++ XP_028083067.1 210 FVCRKCAKTFAVKGDWRTHEKNC 232 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MMDFCFQAPT FIEWLKPSSP ISSPSSTVTQ CLPLLSKLAG TNPFKEEDEG LQKENFGVKE 60 DKFGKVPVAL HIGLPNRGDP DDAEIKSFKF KEEDHALKRF CAQTFNMESR FWIPTPTQIL 120 IGPMQFACFV CSKTFNRYNN MQMHMWGHGS EYRKGPESLR GTQPAAMLRL PCYCCAQGCK 180 NNINHPRAKP LKDFRTLQTH YKRKHGAKPF VCRKCAKTFA VKGDWRTHEK NCGKLWYCTC 240 GSDFKHKRSL KDHMRSFGKG HSPHPSLEGF EDDNKKECIT GSEDENAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-113	C2H2 family protein