PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028082307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 532aa MW: 59777.1 Da PI: 9.5716 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 68.6 | 1e-21 | 208 | 259 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k+r+ Wt LH++Fv+av+qL G +kA+Pk+il++m+ + +++ v+SHLQkY XP_028082307.1 208 KKRVSWTGVLHNKFVDAVRQL-GVDKAVPKKILDIMNEPEISRGSVASHLQKY 259 68*******************.******************************* PP | |||||||
2 | Myb_DNA-binding | 26.3 | 1.8e-08 | 210 | 259 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r +WT ++ ++vdav+qlG + +k+I m+ ++ ++ s++qky XP_028082307.1 210 RVSWTGVLHNKFVDAVRQLGVDkaVPKKILDIMNePEISRGSVASHLQKY 259 679********************************99************9 PP | |||||||
3 | Response_reg | 79.5 | 1.1e-26 | 31 | 139 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l++ +l+k +y +v+++++++eal++l++k+ +D++++D+ m +m+G+ell+ i e ++p+i+++a++++e++ + +k G XP_028082307.1 31 VLVVDDNVVCLKLVAALLNKCHY-KVTATTKATEALKMLRKKKkkYDIVITDVIMLDMNGFELLEIIDLEM-DMPVIMMSANDNKELVMKGVKHG 123 89*********************.***************777777********************998755.9********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp ee+ + XP_028082307.1 124 ARDYLIKPLRLEEVKN 139 *********9999765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 532 aa Download sequence |
MSKIEVVDVS LNRAAPPQSR VNANFPEGLR VLVVDDNVVC LKLVAALLNK CHYKVTATTK 60 ATEALKMLRK KKKKYDIVIT DVIMLDMNGF ELLEIIDLEM DMPVIMMSAN DNKELVMKGV 120 KHGARDYLIK PLRLEEVKNI WQHVVRKNLF NTTKYGTVQA GTYQNPPIPS SKRQRENRNE 180 EEKEEEEEEE EETNTHNEES SAKKKTKKKR VSWTGVLHNK FVDAVRQLGV DKAVPKKILD 240 IMNEPEISRG SVASHLQKYI NALRKENTKA KMSQESENNI NSNKTNGLLS NTITTSCINQ 300 GLNTINHHNR LAEQDMSTGI TSFGSQLQTF GASTSNAKLL QQNQLPPKVV EDQMRPTVLG 360 SVPPSPFFAT NPSPHHELNG MRFHSINSRT KMFGDNVKMS SSQLPSFNIG QSGPSNMPVS 420 FGPYSCPPAT FNLGSVSFQK LGDASNQLNP ISQPDSLAML LPWQHEGRKL ANLKVKEPID 480 SIRKAQFVQH RYPFENTERE INIHHNNSSS FPDDDLLSIV VKQFTKNSAP IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 1e-62 | ARR-B family protein |