PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028081857.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 222aa MW: 24197.7 Da PI: 6.0034 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.5 | 0.0001 | 77 | 99 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H XP_028081857.1 77 YTCTFCRREFRSAQALGGHMNVH 99 9********************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 222 aa Download sequence |
MGAELGLLSL THLQKLAQST QSQHHQPPQN PSSATGSWMW NPKQNTQEDI DDDSWEVRAF 60 AEDTNHAMGT TWPPRSYTCT FCRREFRSAQ ALGGHMNVHR RDRARLHQAP TGLNGLITSS 120 SIASSSTLII PTQELVANGG LCLFYSLPNP NPNGVYAPTP YPTMPPCPAS TNFPVTSPSI 180 NSSLCHSSNT EHSASIDNDN NQNNNSSAIE ELDLELRLGC SP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G17810.1 | 8e-35 | C2H2 family protein |