PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080930.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 300aa MW: 33621.2 Da PI: 8.8214

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080930.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	136	183	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +kK Ka iLe+ ++Y++ Lq XP_028080930.1 136 SHSLAERVRREKISERMRLLQSLVPGC----DKKTGKALILEEIINYVQCLQ 183 8***********************9....9***************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MMSGFLEQEM INNKTTCFSP LHNSGSCLTG NHYYTESSSS MVAVAELLRN GGVGGQPTQV 60 VVTHLEKKRK AMGSKVDGEG KCKKEKKCSD DGMSKNGEEK KIKAERKNKK KKKAPHEPPI 120 GGYVHVRAKR GQATDSHSLA ERVRREKISE RMRLLQSLVP GCDKKTGKAL ILEEIINYVQ 180 CLQNQVQFLV MKLADLYPMF NYLVTNTPAS ENFGNLEPPM QSVTQSDSME LVTAPISTSF 240 LHQQDQSSIF LTQDDGDHLL GDMGDQTHEL YGHNNLCSFE QQITREYLQT GNNRKPVPRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	87	KKRKAMGSKVDGEGKCKKEKK
2	67	103	KKRKAMGSKVDGEGKCKKEKKCSDDGMSKNGEEKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-39	bHLH family protein