PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080184.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 706aa MW: 78700.8 Da PI: 6.7283

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.5	1.1e-08	456	493	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++ LA+++gL+ +qV++WF N R + XP_028080184.1 456 FEHflHPYPTDVDKHILARQTGLSRSQVSNWFINARVR 493 554459******************************88 PP
2	BELL	115.7	2.3e-37	320	388	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+k+kLls+leeVd+rY++y++q+++v+ssFeavag g+a++Y +lA+ka+SrhFrcL+d i++qi XP_028080184.1 320 ELQKRKTKLLSMLEEVDRRYRRYCDQMKAVVSSFEAVAGNGAATVYSALASKAMSRHFRCLRDGIVDQI 388 89******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MAHQGGEEEK HNNNMASSTG YCYSDVSSGN PNIQSHDLVN HQLQSFESNP EIYNLTTGME 60 MIGFPPKSDA DTNSAIWKGF FAGKTGGGGG GGSGGASSSK TMNESAASEF YQQEQFNNKA 120 SEFIALATSE TSETLMVAPP QPPDSTSGWH DQNRLMVDDS SLRCVFPCEG NERPSQGLSL 180 SLSSSNPSTI GLQSFELRQQ QQQQEDDIRF VSSSSRSDGF FGKSMNNVQQ HMIQDVFLGK 240 AANHTQHHNR HGQFLQIRNS KYLGPAQELL NEFCNLGTKQ TDPKTKLKQP HNSKNSQWQD 300 ENTTNNSSKK QSLYNLELLE LQKRKTKLLS MLEEVDRRYR RYCDQMKAVV SSFEAVAGNG 360 AATVYSALAS KAMSRHFRCL RDGIVDQIND TKKAMGEKDT AAPGTTRGET PRLRLLDQTL 420 RQQRAFQQMN MMESHPWRPQ RGLPERSVSV LRAWLFEHFL HPYPTDVDKH ILARQTGLSR 480 SQVSNWFINA RVRLWKPMVE EMYVEETKEQ DNHMVMASTS DDQNPQARPE DQKPTQDQLV 540 RIDSECLSSI INNNPEKNDP KHGTKSPQNH QPPHNLLHHH HHHHQHQEQH SFGRVAETFG 600 AVELDFSTYN HHAVGGVSYA NENAHQSFGG GNSGGGGGVS LTLGLQQHGG SGVSLAFSPA 660 SQSTLFYARD HIEDCQPVQY SLLDGEGQNL PYRNLMGAQL LHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MAHQGGEEEK HNNNMASSTG YCYSDVSSGN PNIQSHDLVN HQLQSFESNP EIYNLTTGME  60
MIGFPPKSDA DTNSAIWKGF FAGKTGGGGG GGSGGASSSK TMNESAASEF YQQEQFNNKA  120
SEFIALATSE TSETLMVAPP QPPDSTSGWH DQNRLMVDDS SLRCVFPCEG NERPSQGLSL  180
SLSSSNPSTI GLQSFELRQQ QQQQEDDIRF VSSSSRSDGF FGKSMNNVQQ HMIQDVFLGK  240
AANHTQHHNR HGQFLQIRNS KYLGPAQELL NEFCNLGTKQ TDPKTKLKQP HNSKNSQWQD  300
ENTTNNSSKK QSLYNLELLE LQKRKTKLLS MLEEVDRRYR RYCDQMKAVV SSFEAVAGNG  360
AATVYSALAS KAMSRHFRCL RDGIVDQIND TKKAMGEKDT AAPGTTRGET PRLRLLDQTL  420
RQQRAFQQMN MMESHPWRPQ RGLPERSVSV LRAWLFEHFL HPYPTDVDKH ILARQTGLSR  480
SQVSNWFINA RVRLWKPMVE EMYVEETKEQ DNHMVMASTS DDQNPQARPE DQKPTQDQLV  540
RIDSECLSSI INNNPEKNDP KHGTKSPQNH QPPHNLLHHH HHHHQHQEQH SFGRVAETFG  600
AVELDFSTYN HHAVGGVSYA NENAHQSFGG GNSGGGGGVS LTLGLQQHGG SGVSLAFSPA  660
SQSTLFYARD HIEDCQPVQY SLLDGEGQNL PYRNLMGAQL LHDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-132	TALE family protein