PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080001.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 576aa MW: 63926.6 Da PI: 7.959

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.9	1.8e-32	242	298	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ d++++ei+Y+g+Hnh XP_028080001.1 242 DDGYNWRKYGQKQVKGSENPRSYYKCTHPNCPTKKKVERTL-DGHITEIVYKGSHNHA 298 8**************************************.*************7 PP
2	WRKY	104.5	5.5e-33	408	466	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_028080001.1 408 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYVGCPVRKHVERASHDIRAVITTYEGKHNHD 466 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MASSGGSLNT SDTSSHNNHN FSFSTQFMPT SFTDLLSNND HHHHHMHAQY QQQDRSRTGF 60 DNQKFKSSSS SSFPPPPPSS SPLSPPPLSP SSYLTIPPGI SPTGLFMDSP AFLSSSNFFQ 120 SPTTGSFGGM EFKGERNFSD FSFQLPQTRP PTTSSSMFQT SSNAIPSEES YKRKHQDWNM 180 NTPSEQAQFS AEKGREKSEF APVQGFPSSE TSTTQTNIHS NTAPPSSHIQ PSQYLREQRR 240 SDDGYNWRKY GQKQVKGSEN PRSYYKCTHP NCPTKKKVER TLDGHITEIV YKGSHNHAKP 300 QSSRRSSSSH LIQPSSSNNM DTSNQSNALS GNAQMDSVAT PENSSVSFGE DDFNQGSSMS 360 KSDDDNENEH EAKRWKGENE NEVISACGNR TVREPRIVVQ TTSDIDILDD GYRWRKYGQK 420 VVKGNPNPRS YYKCTYVGCP VRKHVERASH DIRAVITTYE GKHNHDVPAA RGSAGYAANR 480 AVSNNGNSNV PMAIRPTAMT NNPNYMTTNL NNARLPETKS QAPYTLEMLQ SPAGSFGFAG 540 FGNSSGSYMN QMQTDDVLLR TKEEPKDNAF CDSFLY

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MASSGGSLNT SDTSSHNNHN FSFSTQFMPT SFTDLLSNND HHHHHMHAQY QQQDRSRTGF  60
DNQKFKSSSS SSFPPPPPSS SPLSPPPLSP SSYLTIPPGI SPTGLFMDSP AFLSSSNFFQ  120
SPTTGSFGGM EFKGERNFSD FSFQLPQTRP PTTSSSMFQT SSNAIPSEES YKRKHQDWNM  180
NTPSEQAQFS AEKGREKSEF APVQGFPSSE TSTTQTNIHS NTAPPSSHIQ PSQYLREQRR  240
SDDGYNWRKY GQKQVKGSEN PRSYYKCTHP NCPTKKKVER TLDGHITEIV YKGSHNHAKP  300
QSSRRSSSSH LIQPSSSNNM DTSNQSNALS GNAQMDSVAT PENSSVSFGE DDFNQGSSMS  360
KSDDDNENEH EAKRWKGENE NEVISACGNR TVREPRIVVQ TTSDIDILDD GYRWRKYGQK  420
VVKGNPNPRS YYKCTYVGCP VRKHVERASH DIRAVITTYE GKHNHDVPAA RGSAGYAANR  480
AVSNNGNSNV PMAIRPTAMT NNPNYMTTNL NNARLPETKS QAPYTLEMLQ SPAGSFGFAG  540
FGNSSGSYMN QMQTDDVLLR TKEEPKDNAF CDSFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-113	WRKY family protein