PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078296.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 605aa    MW: 67597.5 Da    PI: 4.7196
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS348.51.1e-1062025991374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal.............. 81 
                     lv+lLl+cAeav  +d++la+++L+++   +sp gd++qR+  +f+ +L+ rl+   ++l +  +  +ts+  +s   +                
  XP_028078296.1 202 LVHLLLACAEAVGCRDTQLADSILCQIWPWVSPLGDSLQRVSYCFAMGLKCRLSLLLNNLNANGTIFTTSNGFVSAMNS-Ivslssstitireee 295
                     68****************************************************9888887776666666333222222.135667788888888 PP

            GRAS  82 ......klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg.....skeeleetger 164
                           +l+++ +P++ f+++++N aI +a++g + +HiiD+++++ lQWp+++++LasRpegpp  lRiTg+++   +       ++l++  + 
  XP_028078296.1 296 mkmeafQLLHQSTPYIAFGFMVTNDAICQAAKGMDSLHIIDLGMQHTLQWPSFIRTLASRPEGPPkLLRITGLVRVGDHhhhqqLLDQLQASIKG 390
                     88888899*****************************************************9998689****98866556644444667777788 PP

            GRAS 165 LakfAeelgvpfefnvlvak...rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                     L + A +lg+p+ef+++ ++       l+ e+L++++gEal Vn++++lh+ ++es  + +   ++L+++k+l P++++vveq+a+hn++ Fl r
  XP_028078296.1 391 LIDEAGSLGIPLEFHLIEEQsttPSLLLTKENLNLREGEALFVNSIMHLHTYVKESRGSLK---TILQAIKKLGPTLLTVVEQDANHNGPFFLGR 482
                     99**************94442113456799***********************87776666...9****************************** PP

            GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                     fle+l+yysa+fdslea +pr+s +r+k+E+++l++ei n++a eg++r+erhe++ +Wr++l++aGF+ v +++  ++qa+++l+ ++ dgy++
  XP_028078296.1 483 FLESLHYYSAIFDSLEAIFPRNSPQRMKIEKMYLAEEINNIIAYEGSNRIERHERADQWRRQLGRAGFQGVGMKD-SMSQARMMLSVYGCDGYTL 576
                     ************************************************************************975.699**************** PP

            GRAS 352 eeesgslvlgWkdrpLvsvSaWr 374
                      +++g+l+lgWk+rp++ +SaW+
  XP_028078296.1 577 ASDKGCLLLGWKGRPIMLASAWQ 599
                     **********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
MATVNGWLFF PMHESLNRQD LAIRRFCPAA RVKQEQAIGG GGGEEEAPSD SVVNDQMEQL  60
WSPTDADTRS STPPPPPPPL PTSEEEEFVD SFFNLDYCYD LIDDSIMVPG KTHDDHDEVF  120
DHFDDQDELF ENLSSIIVDD HVYAYGDGKD IMMIEGDDQL DEIAIKTSTS TIIDHHDHVA  180
DHQQVVSMSS HGDGEVDQGL QLVHLLLACA EAVGCRDTQL ADSILCQIWP WVSPLGDSLQ  240
RVSYCFAMGL KCRLSLLLNN LNANGTIFTT SNGFVSAMNS IVSLSSSTIT IREEEMKMEA  300
FQLLHQSTPY IAFGFMVTND AICQAAKGMD SLHIIDLGMQ HTLQWPSFIR TLASRPEGPP  360
KLLRITGLVR VGDHHHHQQL LDQLQASIKG LIDEAGSLGI PLEFHLIEEQ STTPSLLLTK  420
ENLNLREGEA LFVNSIMHLH TYVKESRGSL KTILQAIKKL GPTLLTVVEQ DANHNGPFFL  480
GRFLESLHYY SAIFDSLEAI FPRNSPQRMK IEKMYLAEEI NNIIAYEGSN RIERHERADQ  540
WRRQLGRAGF QGVGMKDSMS QARMMLSVYG CDGYTLASDK GCLLLGWKGR PIMLASAWQV  600
HNNVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-72GRAS family protein