PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077702.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 273aa    MW: 30912.5 Da    PI: 5.4153
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.23.9e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ll+  ++q+G g+W++ ++  g+ R++k+c++rw +yl
   XP_028077702.1 14 KGPWTAEEDKLLIAFIRQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding40.46.6e-1367112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE++ +++++++lG++ ++  a++++ gRt++++k+ w+++l
   XP_028077702.1  67 RGNFSKEEEDTIINLHEMLGNR-FHFLAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGRAPCCEKM GLKKGPWTAE EDKLLIAFIR QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEEDTIIN LHEMLGNRFH FLAARLPGRT DNEIKNVWHT HLKKRLKNYQ  120
STSNTKGQTV TEPKCDSNAS RESNTMNSGF ESSEYASVSP QDSSSELSSV TDLTGFPNSA  180
VIKDKSMDTS ETFPQIDESF WSEELSTGNS TMQSDFAGFT EELQFQFPLS PSMTASIGTM  240
EHVNEYNFNI DDDMEFWYNL LIKAGGLPEL SEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.17e-88MYB family protein