PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077403.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 280aa    MW: 31773.7 Da    PI: 9.6196
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.61.2e-18137227199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v +  +l lp kf+e+h  +k+  ++++lede+g +++  +   +k+ +  l++GW+ F+ +++L++gD +vF+l++  +f  +v 
  XP_028077403.1 137 FVKSMVRSHVYSCFWLGLPSKFCEDHL-PKTI-VDIVLEDENGAEYDSVY--IGKRTG--LSGGWRAFALDHKLDDGDALVFELIEPARF--KVY 223
                     89*********************9994.4444.79***************..555544..***********************9986666..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_028077403.1 224 IVRA 227
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MANKSGNTYE EARKQRVEDN KKRFEDLGIS KISKSLSDLK SSDKKPVQRY SKPKSENIYM  60
LEPRRSSRAR NPIPSYRDDV DIGLPPLRKR SKISSSWASY LARPLHEVKT PSYEERAQAF  120
KCAEKIQSNL TSGNPSFVKS MVRSHVYSCF WLGLPSKFCE DHLPKTIVDI VLEDENGAEY  180
DSVYIGKRTG LSGGWRAFAL DHKLDDGDAL VFELIEPARF KVYIVRASNC SSDIDDTAVD  240
DEVNSDAENA SNGAKESDLN NEKEPKRLTR SKKGRKQKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.11e-75B3 family protein