PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077142.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 237aa MW: 26468.5 Da PI: 7.9548

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.6	3e-10	68	117	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h +Er RR+++ + + Lr+llP ++K s ++ + v+YIk+Lq XP_028077142.1 68 MHRDIERLRRQEMATLHASLRSLLPLeY---IKGKRSISDHIHESVNYIKHLQ 117 79**********************77...*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MFPLRQSNEL VFHHTPSIPC KQHTIHEDPI AGFTVVEGSN LTTNTTIEER PCKLLDGNTN 60 GKKDKTIMHR DIERLRRQEM ATLHASLRSL LPLEYIKGKR SISDHIHESV NYIKHLQKKI 120 KEMEIKRDKL KKLSDSSVPA TAIGSSKNCF PNSTVTVNPC LVGVEILISS SGEEGLAFPL 180 SKVMGVLVEE GLNVVSYVST QVNERLFHSI KSEVTDQMCV DPSVLQKNLS VVINSEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	132	QKKIKEMEIKRDKLKK
2	128	133	DKLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	3e-40	bHLH family protein