PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028076691.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 438aa MW: 50324.2 Da PI: 4.5558

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028076691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.4	2.6e-13	186	277	1	88
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ +lt+sd ++ rl++p a ++ k++ ++++ ++d + + W+++l+y+ +++v+t+GW++Fv+ ++Lk D + F+++ ++ XP_028076691.1 186 FEVQLTRSD-IEHERLSIPAGGALKYfppmeTVKPNYEQQIEIYDNEKEDWKMTLTYNHLEQAFVITSGWQGFVDWHELKPMDAIRFYRTFSH 277 666775555.55668***********9984455566789999*****************************************966544 PP
2	B3	36.2	1e-11	309	393	1	83
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+ +l+psd + l++p + +++h g ++ e +t++d+++ W +++ ++ g+y+l++GW +Fvk+++L++ D++ F+ XP_028076691.1 309 FELQLSPSDIGDGV-LIVPEEEVRNHfheinipaGTNEVE--RMTFTDTQNVHWCMEILFD---GAYMLADGWDGFVKEHKLEAMDMIRFY 393 77888888888765.999*********99987555545..69**********655...569*********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MSQSRDTSIP FNITLEHVLP LPLPLPPRAY LARTSMKTAT DKEGKRSKKE QVEEEEEKAK 60 QVSKEENASS STPLLEETST ETEETATETS IKIATDKEGK RIEKEQEEEK GKKVSKEENA 120 SSSTPLEETA TETEGSDKGN VDLLHLNKLT THDDDDVIPQ SKPGDSSDRA AINEEVCGFD 180 REIFLFEVQL TRSDIEHERL SIPAGGALKY FPPMETVKPN YEQQIEIYDN EKEDWKMTLT 240 YNHLEQAFVI TSGWQGFVDW HELKPMDAIR FYRTFSHLQN PHFLIEFVIG EESKTNYLIH 300 EFKQKNFLFE LQLSPSDIGD GVLIVPEEEV RNHFHEINIP AGTNEVERMT FTDTQNVHWC 360 MEILFDGAYM LADGWDGFVK EHKLEAMDMI RFYKPVRPLH EKHFLIECVK REQAACGTNQ 420 IWLGGAKHDW EETAISPN

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MSQSRDTSIP FNITLEHVLP LPLPLPPRAY LARTSMKTAT DKEGKRSKKE QVEEEEEKAK  60
QVSKEENASS STPLLEETST ETEETATETS IKIATDKEGK RIEKEQEEEK GKKVSKEENA  120
SSSTPLEETA TETEGSDKGN VDLLHLNKLT THDDDDVIPQ SKPGDSSDRA AINEEVCGFD  180
REIFLFEVQL TRSDIEHERL SIPAGGALKY FPPMETVKPN YEQQIEIYDN EKEDWKMTLT  240
YNHLEQAFVI TSGWQGFVDW HELKPMDAIR FYRTFSHLQN PHFLIEFVIG EESKTNYLIH  300
EFKQKNFLFE LQLSPSDIGD GVLIVPEEEV RNHFHEINIP AGTNEVERMT FTDTQNVHWC  360
MEILFDGAYM LADGWDGFVK EHKLEAMDMI RFYKPVRPLH EKHFLIECVK REQAACGTNQ  420
IWLGGAKHDW EETAISPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	2e-10	RAV family protein