PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076235.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 501aa    MW: 55590.4 Da    PI: 5.193
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.61.3e-1041244951374
            GRAS   1 lvelLlecAeavss..gdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                     lv+lL+++Aea++   +++ela+ +L rl++lasp++ ++m+Rlaa+ft AL+  l +   +  k + + +++  +++++laa++l++++sP++k
  XP_028076235.1 124 LVHLLMAAAEALTGvnKSHELARVILVRLKDLASPTDgTNMERLAAHFTHALQGLLEG---GAGKYMGSHHDP--HQTDVLAAFQLLQDMSPYVK 213
                     68**********98446677************9998769******************9...555555444444..4789**************** PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlva 183
                     f+h+taNqaIleav++++rvHi+D+di++G+QW++L+qaL sR++gpp  +lRiT++++  ++  s  +++etg+rL  fA+++g ++ f+    
  XP_028076235.1 214 FGHFTANQAILEAVAQDKRVHIVDYDIMEGIQWASLMQALVSRKDGPPapHLRITAISRGGASrrSIGTVQETGRRLIAFAASIGQSLTFHQCRL 308
                     ********************************************776555********9766678999************************999 PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpr 277
                     ++ e++++++L++ +gEal+ n++l l ++     + ++ + ++L+  k+l+P++v+++e+e+   +++ F+ rf+++l++ysa++dslea++p 
  XP_028076235.1 309 DSNETFRPSNLKLVRGEALVFNCMLYLSHFN---YCASDSIASFLSGAKTLNPRLVTLAEEEVGPvGDGGFAGRFMDSLHHYSAVYDSLEAGFPM 400
                     9*****************************8...555556789*******************9988***************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvS 371
                     +s++r  vEr++lg++i+  +a   +e    +e+  +W e+l+++GF+pv++s  + +qaklll  ++ dgy+vee  ++ lvl Wk+r+L+s+S
  XP_028076235.1 401 QSRARELVERVFLGPQISGSLARIYRE--SGEEESCSWGEWLGAVGFHPVNVSFANHCQAKLLLGLFN-DGYKVEELaNNRLVLRWKTRRLLSAS 492
                     ************************999..6667789********************************.******97588999************ PP

            GRAS 372 aWr 374
                     +W+
  XP_028076235.1 493 VWT 495
                     **6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MDMVVDTVTE FELDLSNYNN STTTTTTTTT NTSTTTTPLL GDHWWSNWND WSPVDGLLVI  60
DWDSFSDNHD NFHDLIESMM DNNNNNSEQQ HDPEAKVLST TATIEVEEEE EMTGRIGDFK  120
GLRLVHLLMA AAEALTGVNK SHELARVILV RLKDLASPTD GTNMERLAAH FTHALQGLLE  180
GGAGKYMGSH HDPHQTDVLA AFQLLQDMSP YVKFGHFTAN QAILEAVAQD KRVHIVDYDI  240
MEGIQWASLM QALVSRKDGP PAPHLRITAI SRGGASRRSI GTVQETGRRL IAFAASIGQS  300
LTFHQCRLDS NETFRPSNLK LVRGEALVFN CMLYLSHFNY CASDSIASFL SGAKTLNPRL  360
VTLAEEEVGP VGDGGFAGRF MDSLHHYSAV YDSLEAGFPM QSRARELVER VFLGPQISGS  420
LARIYRESGE EESCSWGEWL GAVGFHPVNV SFANHCQAKL LLGLFNDGYK VEELANNRLV  480
LRWKTRRLLS ASVWTTPDSN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-156GRAS family protein