PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028074829.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 27311 Da PI: 8.2097 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 9e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtf+kRrng+lKKA+EL +LCdaev +iifsst klye++s XP_028074829.1 10 RIDNTTSRQVTFTKRRNGLLKKAKELAILCDAEVGLIIFSSTSKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 78.7 | 1.5e-26 | 76 | 169 | 8 | 98 |
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++ ++ + +q+e++ L+++++nLq++ R+l+Ge+L Ls+ +Lq+Le+qLe sl+ +R +K+++l+++i+el +ke+ +++en +L kk XP_028074829.1 76 RqlqNQVSEVKFWQREAEILRQQLHNLQENYRQLMGEELYGLSVHDLQKLENQLEMSLRGVRMQKDQVLMDEIQELSQKENFMHQENVELYKKA 169 2333677889********************************************************************************9985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MGRGKIVIRR IDNTTSRQVT FTKRRNGLLK KAKELAILCD AEVGLIIFSS TSKLYEFAST 60 SMKSVIERYN KSNEERQLQN QVSEVKFWQR EAEILRQQLH NLQENYRQLM GEELYGLSVH 120 DLQKLENQLE MSLRGVRMQK DQVLMDEIQE LSQKENFMHQ ENVELYKKAN LIRQENMELC 180 KKIYGTRDVT AANGSTQNPH GFSIGEDSYV PINLQLSQPE QQSHEMPARE TRSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-101 | MIKC_MADS family protein |