PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028074828.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28626.5 Da PI: 8.6427 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.9 | 9.7e-27 | 21 | 70 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtf+kRrng+lKKA+EL +LCdaev +iifsst klye++s XP_028074828.1 21 RIDNTTSRQVTFTKRRNGLLKKAKELAILCDAEVGLIIFSSTSKLYEFAS 70 8***********************************************86 PP | |||||||
2 | K-box | 78.5 | 1.7e-26 | 87 | 180 | 8 | 98 |
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++ ++ + +q+e++ L+++++nLq++ R+l+Ge+L Ls+ +Lq+Le+qLe sl+ +R +K+++l+++i+el +ke+ +++en +L kk XP_028074828.1 87 RqlqNQVSEVKFWQREAEILRQQLHNLQENYRQLMGEELYGLSVHDLQKLENQLEMSLRGVRMQKDQVLMDEIQELSQKENFMHQENVELYKKA 180 2333677889********************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MIQTLESRTV RMGRGKIVIR RIDNTTSRQV TFTKRRNGLL KKAKELAILC DAEVGLIIFS 60 STSKLYEFAS TSMKSVIERY NKSNEERQLQ NQVSEVKFWQ REAEILRQQL HNLQENYRQL 120 MGEELYGLSV HDLQKLENQL EMSLRGVRMQ KDQVLMDEIQ ELSQKENFMH QENVELYKKA 180 NLIRQENMEL CKKIYGTRDV TAANGSTQNP HGFSIGEDSY VPINLQLSQP EQQSHEMPAR 240 ETRSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-101 | MIKC_MADS family protein |