PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074215.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 280aa    MW: 30847.8 Da    PI: 9.6362
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+e l  +v+++G+g Wk I +          R+  ++k++w++
   XP_028074215.1  5 KQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEfnhflYSRSNIDLKDKWRN 55
                     79************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGNPKQKWTS EEEEALRAGV AKHGTGKWKN IQKDPEFNHF LYSRSNIDLK DKWRNMSVSA  60
NSQGSREKSR TTKAKANPDA PATPLPNAPT STSITPAANG ASADAVMDDS SKCLLDGKTA  120
SKYNAMIYEA LSTLKDPNGS DTSAIVSFIE QRHEVPQNFR RLLSSRLRRL VAQDKLEKVQ  180
NCYKIKRDVL VVAKTPTPKP KDTIRPRQSQ TTGYLGDTVE EAAVGAAYKV AEAENKSFVA  240
AEAVKEAERV SRMAEDTDSL LQLAKEIFEK CSRGEIVLMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.15e-63MYB_related family protein