PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074144.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 317aa    MW: 37061.6 Da    PI: 8.3684
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS97.52e-3082323235
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +l+ +  ea+++g+ +l + +++r+se +sp g  m R   y+ +   ++              +++s     + laa+ +f++++P  kf+h++
  XP_028074144.1   8 HLIKAYREAIDEGQIQLSEVIVKRISEKVSPVGGVMDRFLYYLFQSFDKQADY----------LRQES---NNNFLAAFMTFYQIFPDGKFAHFA 89 
                     666677799***********************************999998876..........33333...56899999**************** PP

            GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl.vakr 185
                     aN+aIl+a+ ++ e +Hii fd+++G+QWp++++a+  ++++  +lR+T  + +e +     s  +  et++ L + A+++ v++  +++ +++ 
  XP_028074144.1  90 ANRAILQAMPHDvELIHIIEFDMGEGIQWPSMIEAIGWQQRKEIRLRLTSGKWSEGDsdcspSPWRFTETRRWLCDHAQAFCVKLTVDTMeLHDL 184
                     *********9998999*********************************988866557898888899999999****************833334 PP

            GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksls 235
                     ++++++ + + +++E l+ n++l+l ++   +v ++   +++L++ k+l 
  XP_028074144.1 185 VNEMKTMKRNGRRREWLVFNCMLRLPHMG--RVRSRRDLSKFLRVAKELL 232
                     4444444555555***************8..5555555799***999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEINNVIHLI KAYREAIDEG QIQLSEVIVK RISEKVSPVG GVMDRFLYYL FQSFDKQADY  60
LRQESNNNFL AAFMTFYQIF PDGKFAHFAA NRAILQAMPH DVELIHIIEF DMGEGIQWPS  120
MIEAIGWQQR KEIRLRLTSG KWSEGDSDCS PSPWRFTETR RWLCDHAQAF CVKLTVDTME  180
LHDLVNEMKT MKRNGRRREW LVFNCMLRLP HMGRVRSRRD LSKFLRVAKE LLAYVTNRNF  240
DRKSFSTQNP IIELDVGSIS CENIVFSFMI RSCARRRTDF DNMGIIAFGD GDVWVNPKIS  300
SSFGSFLDGH LVHYKLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.11e-16GRAS family protein