PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073974.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 421aa MW: 47019.2 Da PI: 6.7043

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.1	5.8e-17	132	181	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f++Lr+l+P++ +++ +Ka+ L ++++YI+ Lq XP_028073974.1 132 RSKHSETEQRRRSKINERFQTLRDLIPQN----DQRRDKASFLLEVIQYIQFLQ 181 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MIHCSKSEAR IELTGHWKIR PWQGLPPAKA GDGRWSVEVP MDPTAEIRLG GRSTDRRYLS 60 PITTNTSSIS VSLCDHTRNR GRSSGEMVIG VKSHHEDEEE DDEELVRRTT DGCSQKVKVD 120 GKTTDQKANS LRSKHSETEQ RRRSKINERF QTLRDLIPQN DQRRDKASFL LEVIQYIQFL 180 QEKLQLYEGP YQSWGQEPSK LIPWRNSGGP VESFIDQSEL TRNGSGQEDN IVVTPSMLTN 240 AHNSVESVLE VAAYKVMDHP PLAANQAIPT HIPLQSSVLG DVPTQPHQAS VSDSEHLASQ 300 SQSQFWQSRP CTTESAVPSY THEQEMKFES DEANISNAYS QGLLNTLTRA LQSSGVDLSQ 360 ASISVQLDVG KRANTALTAT LFSVKDHQNR IPGGQSRAVY GFGTRCDDCT QAPKRLRTER 420 I

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MIHCSKSEAR IELTGHWKIR PWQGLPPAKA GDGRWSVEVP MDPTAEIRLG GRSTDRRYLS  60
PITTNTSSIS VSLCDHTRNR GRSSGEMVIG VKSHHEDEEE DDEELVRRTT DGCSQKVKVD  120
GKTTDQKANS LRSKHSETEQ RRRSKINERF QTLRDLIPQN DQRRDKASFL LEVIQYIQFL  180
QEKLQLYEGP YQSWGQEPSK LIPWRNSGGP VESFIDQSEL TRNGSGQEDN IVVTPSMLTN  240
AHNSVESVLE VAAYKVMDHP PLAANQAIPT HIPLQSSVLG DVPTQPHQAS VSDSEHLASQ  300
SQSQFWQSRP CTTESAVPSY THEQEMKFES DEANISNAYS QGLLNTLTRA LQSSGVDLSQ  360
ASISVQLDVG KRANTALTAT LFSVKDHQNR IPGGQSRAVY GFGTRCDDCT QAPKRLRTER  420
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G38860.1	5e-63	bHLH family protein