PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073596.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 532aa    MW: 58336.1 Da    PI: 5.0344
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.74.1e-1271565191374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv++L++cAe v+ g+++la++l+ ++++l  + +++  + ++a yf  AL++rl+   ++ +    +  +      e+   ++ f+e++P+lkf
  XP_028073596.1 156 LVHALMTCAESVQRGEFSLATTLIDEMHNLltRINTDCGIGKVAGYFIDALSRRLFA--PQGVG---SVGS----AYENEILYHHFYEACPYLKF 241
                     689**************************9644455569*****************9..22222...2222....3455577899********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea+eg+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++++++l+etg rLa++A++++v+f f+ ++a rled
  XP_028073596.1 242 AHFTANQAILEAFEGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDRHDSLRETGLRLAELARSVNVRFAFRGVAAARLED 336
                     ***************************************************************************************9999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+Ea+a+n+v+qlhrll  + +  s++d vL  +++l+Pk+++v+eqea+hn+++Fl rf+eal+yys++fdsle+    +++ ++
  XP_028073596.1 337 VKPWMLQVDPKEAVAINSVMQLHRLLVPDPTRGSPIDIVLGWIRRLNPKIMTVIEQEANHNQPEFLGRFTEALYYYSTMFDSLEVC---TAQPEK 428
                     **************************9999999***************************************************99...678888 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      + ++++++ei+nvv+ceg++++erhe l+kWr+rl  aGF+p++l+++a  qa++ll  ++  gy vee++g+l+lgW++rpL+++SaW+
  XP_028073596.1 429 ALTEMYIQKEICNVVCCEGSAQVERHEPLAKWRARLVGAGFRPLHLGSNAFRQASMLLTLFSAGGYCVEEKEGCLTLGWHSRPLIAASAWQ 519
                     888999************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MGPYDASMSS SGSNSSSSSA GEAPDQIDGL LAGAGYTVRS SELRHVAQRL ERLENVMVNA  60
PAEVSQLAND AVHYNPSDLG SWVDSLLSEF NQPVLVPASA DLPEYSDLSY LDGLVGPALD  120
PTVNNTGSWA EHRGAEQQQE IPRQLSVVEE DSGIQLVHAL MTCAESVQRG EFSLATTLID  180
EMHNLLTRIN TDCGIGKVAG YFIDALSRRL FAPQGVGSVG SAYENEILYH HFYEACPYLK  240
FAHFTANQAI LEAFEGHDCV HVVDFNLMHG LQWPALIQAL ALRPGGPPLL RLTGIGPPSP  300
DRHDSLRETG LRLAELARSV NVRFAFRGVA AARLEDVKPW MLQVDPKEAV AINSVMQLHR  360
LLVPDPTRGS PIDIVLGWIR RLNPKIMTVI EQEANHNQPE FLGRFTEALY YYSTMFDSLE  420
VCTAQPEKAL TEMYIQKEIC NVVCCEGSAQ VERHEPLAKW RARLVGAGFR PLHLGSNAFR  480
QASMLLTLFS AGGYCVEEKE GCLTLGWHSR PLIAASAWQA IPQTNPPPPL GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-135GRAS family protein