PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028073480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YB | ||||||||
Protein Properties | Length: 223aa MW: 24899.3 Da PI: 8.9564 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 141.5 | 2.2e-44 | 45 | 140 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +e+d+f+Pian++rim++vlP++akis+d ke vq+c+s+fisf+t+ea+++c++e+ kt++++d+l a++ lGfedyvepl+++l++yr +e+e XP_028073480.1 45 SEHDQFMPIANITRIMRRVLPQHAKISDDVKEYVQQCISKFISFITGEANERCHHEQGKTVTAQDILSAMGRLGFEDYVEPLTLFLNHYRGIESE 139 799*****************************************************************************************998 PP NF-YB 97 k 97 + XP_028073480.1 140 H 140 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MGAKDIFTRC YCLIFSNLIS ALIATKRHRR AKNSNREQSL PVFVSEHDQF MPIANITRIM 60 RRVLPQHAKI SDDVKEYVQQ CISKFISFIT GEANERCHHE QGKTVTAQDI LSAMGRLGFE 120 DYVEPLTLFL NHYRGIESEH TLMRGEPFVK RTTGDFVQPG PGNYGPQGFP VTQTQAQGLL 180 DAHAAMMKKG MNSYYGDSRG GGSSSSSQAA LPSFDPCGQF KRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 1e-50 | NF-YB family protein |