PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073060.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 404aa    MW: 45690.2 Da    PI: 6.5921
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-05119140223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     +C+ Cgk Fs+   L  H+r H
  XP_028073060.1 119 VCKQCGKGFSSMKALFGHMRHH 140
                     6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MEEEDQGQKK FVCKVCSKSF FSGRSLGGHM RCHLVTNSAK KHEDHHNGTT TTMDLEGGDD  60
DCYGLRENPK KSWRVSDEKQ SITAIQENHC KQCGKEFPSV RALSGHMRCH SIKSRIENVC  120
KQCGKGFSSM KALFGHMRHH SKRSRVESQS DHQSTLRYKI NGNLHLPNLN ASCSYVSEID  180
EVEEAAMCLM MLSRDVRNRV EFDSVMEASE NFAVPFEAKA LHQSKDDDDT RKIKKPRKKL  240
DSCLSCSGNS LFEKNESEFG DLDSGFMSKN EKNFELGLSI EGFHKGDESK NTEANSKIEC  300
CNENSVEQIQ TLKNKDYDCP ICFKVFPSGQ AMGGHKRAHY IGILSENKNK ESVLAKQEFP  360
NIQNVFDLNL QVTLENEIND DDGVAFKPWW VGSDHEPEPL VISN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-39C2H2 family protein