PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028072706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27869.9 Da PI: 8.9715 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.4 | 5.2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gklye+s+ XP_028072706.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPKGKLYEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 74.9 | 2.1e-25 | 81 | 175 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s++++++++ ++l++e+ L ++ie Lq ++R+llG++Les + eLqq+++q+e+sl+kiR++K+++++e+ie+l++ e+ l een +Lr+kl+ XP_028072706.1 81 SSNNAAQENLQHLKEEAVSLSEKIELLQVSKRKLLGDGLESSCIDELQQVQDQIEQSLSKIRARKTQVFKEKIEQLKEEERILTEENAKLREKLK 175 455689999***********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP KGKLYEFSNS 60 RRLSINKTID RYQKNAKDLG SSNNAAQENL QHLKEEAVSL SEKIELLQVS KRKLLGDGLE 120 SSCIDELQQV QDQIEQSLSK IRARKTQVFK EKIEQLKEEE RILTEENAKL REKLKCDQME 180 LPCLAFAQEV PTQREISDVE TELFIGPPDE QRTTRWLIQS STAINGMRLR YKKPESFPGF 240 EC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-76 | MIKC_MADS family protein |