PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072647.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 308aa    MW: 35665.9 Da    PI: 6.1289
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.36.3e-5371351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yLk+k+++ k++l +vi ++d+y++ePwd++      ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk v
  XP_028072647.1   7 VPPGFRFHPTEEELVEYYLKRKINSLKIDL-DVIVDIDLYRIEPWDIQDrcrLGYEEQSEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVV 100
                     69****************************.99**************943432234666************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ls k++ +g++ktLvfykgrap+g+k+dW+mheyrl
  XP_028072647.1 101 LS-KNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRL 135
                     *9.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VEYYLKRKIN SLKIDLDVIV DIDLYRIEPW DIQDRCRLGY  60
EEQSEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKVV LSKNRIIGMR KTLVFYKGRA  120
PNGRKSDWIM HEYRLQTSEH APPQEEGWVV CRAFKKPSPN HKQGFQAWNN AYYAMDNGNF  180
NLPSCSDSVA PMQMVYTNQG IAFPQSPFGS EQDLISNHTH LENQLVELPQ LDSPSLSESL  240
ATKGGSDQQN GIINKDCEDE RSNQGCQYVD WKNLDNWLNH SNFPLVSQEY ELNAHNHASH  300
LFTCFPDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.15e-97NAC family protein