PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072384.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 274aa    MW: 32122.1 Da    PI: 10.0546
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.73.7e-1723107899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       +l s rl++p  f++ ++g+ + + t+t   +s ++W+v++  ++  +  ++ kGWk+Fv++n L+ gDf++F++ g+ +f  +vk++ k
  XP_028072384.1  23 LPNLCSLRLRIPPAFVKYFDGVLPHKSTIT---SSAKRWQVNM--NQVNDDLYFDKGWKQFVQDNSLEFGDFLIFYYGGNAKF--YVKIYGK 107
                     55667779********66676644444555...799*******..999999**************************997777..9999876 PP
2B363.92.5e-20178272199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ff v ++s +lk+g++ +p +f++++ +k +es  +tl + s + W vkl   ++ g+ + +++GW  F+k+n +k gD++vF+l++r++f+l+v
  XP_028072384.1 178 FFRVVMSSTYLKRGIMNIPASFLKSYVEKDRES--VTLLS-SDKLWPVKL--VRYLGTvCRFSSGWHMFCKENAIKKGDVCVFELVERDDFTLKV 267
                     88999*********************6666665..77666.89*******..6666666889********************************* PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++f++
  XP_028072384.1 268 SIFER 272
                     **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVKAHRRKLR FSERSPQFFK LYLPNLCSLR LRIPPAFVKY FDGVLPHKST ITSSAKRWQV  60
NMNQVNDDLY FDKGWKQFVQ DNSLEFGDFL IFYYGGNAKF YVKIYGKNGC QKEVTNPTGE  120
THQENETIDH SKSCQIACRT SSKKVIRKKH LSPRVPNEIQ EDDIDRELRD KFKSKFPFFR  180
VVMSSTYLKR GIMNIPASFL KSYVEKDRES VTLLSSDKLW PVKLVRYLGT VCRFSSGWHM  240
FCKENAIKKG DVCVFELVER DDFTLKVSIF ERVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-21B3 family protein