PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028071580.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 444aa MW: 50953.4 Da PI: 5.0052

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028071580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.6	1.3e-35	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+ ++ ++sws++g+sf+v+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g+++ll++ XP_028071580.1 14 FLSKTYEMVDDSVTNPIVSWSQSGQSFIVWNPPDFARDLLPKYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEEFIRGQRHLLKN 99 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_028071580.1 100 IHRRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MDGSQGGSNA PPPFLSKTYE MVDDSVTNPI VSWSQSGQSF IVWNPPDFAR DLLPKYFKHN 60 NFSSFVRQLN TYGFRKIDPD QWEFANEEFI RGQRHLLKNI HRRKPIHSHS AQNSSVPLTD 120 SERQEFEEEI ERLKHEKSFF QMELQRYEQE KHGYEFQVRS LGERLKTIKD RQRQMMVFLA 180 QELDEPRFAF SHMQPSEIHN KKRRLLISNY LYDEANVGED QLMTFQKENL DATSVPVLNL 240 ELIEKLESSL NFWENFIRGV RQTSNEEIYD FGVHPQPSSV IITEMHESSR DSDMNAHQSS 300 PPLQSSSPDS RDVHSSPELA VSSAHLENPA ITSIGLNVDV WSKSSGIDVN LKPVDGPVVN 360 ALKERVEGTT PPAVVTGAND VFWEQFLTET PGSSDTQEVQ SERRDINGIR SETKQADNPK 420 FWRNMNNVDN LTEQMGHLTP GEST

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MDGSQGGSNA PPPFLSKTYE MVDDSVTNPI VSWSQSGQSF IVWNPPDFAR DLLPKYFKHN  60
NFSSFVRQLN TYGFRKIDPD QWEFANEEFI RGQRHLLKNI HRRKPIHSHS AQNSSVPLTD  120
SERQEFEEEI ERLKHEKSFF QMELQRYEQE KHGYEFQVRS LGERLKTIKD RQRQMMVFLA  180
QELDEPRFAF SHMQPSEIHN KKRRLLISNY LYDEANVGED QLMTFQKENL DATSVPVLNL  240
ELIEKLESSL NFWENFIRGV RQTSNEEIYD FGVHPQPSSV IITEMHESSR DSDMNAHQSS  300
PPLQSSSPDS RDVHSSPELA VSSAHLENPA ITSIGLNVDV WSKSSGIDVN LKPVDGPVVN  360
ALKERVEGTT PPAVVTGAND VFWEQFLTET PGSSDTQEVQ SERRDINGIR SETKQADNPK  420
FWRNMNNVDN LTEQMGHLTP GEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	5e-89	HSF family protein