PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028071437.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | bHLH | ||||||||
Protein Properties | Length: 178aa MW: 20032 Da PI: 9.12 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.1 | 3.7e-09 | 13 | 61 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + +E++RR+++++ +++L +l+ + + ++++ +s + +A +YIk+Lq XP_028071437.1 13 KTIEKNRRNQMKTLYSKLHSLVHPhN--TKQEAMSLTDQIDEAANYIKKLQ 61 679*******************9956..56666*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MEHNPSSSIN DRKTIEKNRR NQMKTLYSKL HSLVHPHNTK QEAMSLTDQI DEAANYIKKL 60 QKNLEKLKQK RDSLMGVEKP KARMKSTTNV GLRSPQIEIN MMGSALDVVL ITGLDCQFMF 120 NETIRVIHEE GAEIVNASFS VVDDTVFHTI HSKVGESGLG CGVASITERL KKFVYDAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-38 | bHLH family protein |