PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071125.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 338aa    MW: 37197.1 Da    PI: 5.6926
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.5e-13102153155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h  +Er+RR+++N+ ++ Lr+l+P+    + k+ + a+i   +v+YI++Lq
  XP_028071125.1 102 QKVSHITVERNRRKQMNENLSVLRSLMPSF---YVKRGDQASIIGGVVDYINELQ 153
                     6899*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGGSDSLFDF LEESEDIFSF LESLEGAVEE FPLVLSPLEE NGLGLKEKIE TPTRLVSQKS  60
ASSSAFQESE TEIEICSPKR KRQKHTETQG FSEELANPDG QQKVSHITVE RNRRKQMNEN  120
LSVLRSLMPS FYVKRGDQAS IIGGVVDYIN ELQQVLHSLE TKKQRKVYSE MLSPRIVSSP  180
RPSPLSPRKP PLSPRLTSVP ISPGTPQPTS PYKPRLHQGY LSPTIPTSLE PSSSCSSSSS  240
SINDSVNELV ANSKSAIADV EVKFTGANLL LKTVSPRIPG HASKIVSALE DLSLEILHVS  300
INTIDETMVN SFTIKIGIEC RLSADELAHQ IQQTFCCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.15e-90bHLH family protein