PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070755.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 286aa MW: 32607.8 Da PI: 9.5423

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.8e-15	133	222	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp f+++h ++ + +tl de+ ++ + k+ +k++ l++GW++F+ +++L +gD +vF+l++ ++f +v XP_028070755.1 133 FVKPMLQSHVTGGFWLGLPVYFCNSHL--PTHDEFITLLDEDDNESSTKYLAEKTG----LSAGWRGFAIDHELVDGDALVFQLIQPTKF--KVY 219 89*******************9994..234457***********555555....***********************97777..888 PP EE- CS B3 96 vfr 98 ++r XP_028070755.1 220 IIR 222 877 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MVVSKVAYEE SRRKRLEENK KRMEELNLNK LAQSLKTSAT PKPSPMKRVK PQMPRQPVDL 60 SAVRRSRRVA DKPPPSYREE PIEPLGRRSY HRTYNYKPRD LSNRVYASHE DRVYAIERAE 120 KLQSGLDPDI PSFVKPMLQS HVTGGFWLGL PVYFCNSHLP THDEFITLLD EDDNESSTKY 180 LAEKTGLSAG WRGFAIDHEL VDGDALVFQL IQPTKFKVYI IRVNQVEDSD ETPNQVEDSG 240 DIQNVTNVDI GTRRTRASIL HTSSSSEAPN VTDIGIGTRR TRSSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	6e-92	B3 family protein