PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070577.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 384aa    MW: 41797.4 Da    PI: 8.0712
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.58.7e-19236269134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++C ++kTp+WR+gp g+ktLCnaCG++yr+ +
  XP_028070577.1 236 CAHCDVSKTPQWREGPMGPKTLCNACGVRYRSGR 269
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MVGSEFFDRT NNGVCSDGFM ENLKFFDFPM ESLEGDGLDE GDWDAKLQGL GPIPSESLMA  60
SLLTSGGDIG NAGSVVTPNL SVASEHSSEL KLLPNLAETA SGASIPLQND HSDRLEPGMF  120
QVPSPVSVLE SSSSCSVEKN VSFSFKPYIP ARTRTKRSRS STINPWVVMT PPISSTSKRS  180
HHLLAQSNDF PESNLPNMNS NPVKRKLKKK KKLSQLSRAN EIDGTSLQRP IATKRCAHCD  240
VSKTPQWREG PMGPKTLCNA CGVRYRSGRL FPQYRPALSP TFVPSLHSNS HKKVVEMRNK  300
AIQEAAKAEA EPPMSPAHKP NKKAAITETE PPLSPFKATQ EATIAETEPP LSPPPEFVPM  360
SSYLFDFDCI LGVEGNAPRM GGFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152157RTRTKR
2207213LKKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-37GATA family protein