PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 400aa MW: 44753.6 Da PI: 6.7391 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 368.4 | 9.7e-113 | 28 | 398 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPilk 92 lv+lLl+cAeav+ +d++ a+alL++l+ a g+++qR+a++f+++L+ rla +l + + p +t++kn s e+ al+l ++++P ++ XP_028070457.1 28 LVQLLLACAEAVACRDKSHASALLSELRSEALVFGTSFQRVASCFVQGLSDRLAL--VHLLRGIVPAATPPKNmaiSLEKEEALSLVYDICPQIQ 120 689***************************************************8..77777777777777776888899999999********* PP GRAS 93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182 f+h++aN aIlea+ege+ vHi+D++++ +G QW L++ L +R+++pp ++RiTgvgs e l+ +g+ L+++A++l+++fef v v XP_028070457.1 121 FGHFIANAAILEALEGESSVHIVDLGMTlclrHGHQWRRLMHGLVNRAGQPPrRVRITGVGS----CGEHLRGIGDELERYARTLDLNFEFLV-V 210 **************************853333899*************877779********....**************************9.7 PP GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 +++le+l+ +e+ v+ E+l++n++lqlh +++es + +vL+++ +l+Pk +v+veq+++hn++ Fl rf+eal+yy+a+fdsl+a lpr XP_028070457.1 211 ESNLENLQAKEFGVRGSEVLVINSILQLHCVVKESRGALN---SVLQTMHELNPKALVLVEQDSSHNGPFFLGRFMEALHYYAAIFDSLDAMLPR 302 9*******************************88877777...8*************************************************** PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371 + r+k+E++++++ei+n+v+ceg +r+erh +l +Wr+r+++aGF+p p++ + +qak l +++ +gy+v ee+g+lvlgWk++p+v++S XP_028070457.1 303 YDTRRVKMEQFFFAEEIKNIVSCEGPARVERHDRLDQWRRRMSRAGFQPSPIK--MLSQAKQWLGEINfCEGYTVVEEKGCLVLGWKSKPIVAAS 395 ***************************************************96..79************************************** PP GRAS 372 aWr 374 +W+ XP_028070457.1 396 CWK 398 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence |
MNEAAKALVN DEGDDHVKEE VTGDGVRLVQ LLLACAEAVA CRDKSHASAL LSELRSEALV 60 FGTSFQRVAS CFVQGLSDRL ALVHLLRGIV PAATPPKNMA ISLEKEEALS LVYDICPQIQ 120 FGHFIANAAI LEALEGESSV HIVDLGMTLC LRHGHQWRRL MHGLVNRAGQ PPRRVRITGV 180 GSCGEHLRGI GDELERYART LDLNFEFLVV ESNLENLQAK EFGVRGSEVL VINSILQLHC 240 VVKESRGALN SVLQTMHELN PKALVLVEQD SSHNGPFFLG RFMEALHYYA AIFDSLDAML 300 PRYDTRRVKM EQFFFAEEIK NIVSCEGPAR VERHDRLDQW RRRMSRAGFQ PSPIKMLSQA 360 KQWLGEINFC EGYTVVEEKG CLVLGWKSKP IVAASCWKCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 2e-75 | GRAS family protein |