PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070457.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 400aa    MW: 44753.6 Da    PI: 6.7391
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.49.7e-113283981374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPilk 92 
                     lv+lLl+cAeav+ +d++ a+alL++l+  a   g+++qR+a++f+++L+ rla    +l + + p +t++kn   s e+  al+l ++++P ++
  XP_028070457.1  28 LVQLLLACAEAVACRDKSHASALLSELRSEALVFGTSFQRVASCFVQGLSDRLAL--VHLLRGIVPAATPPKNmaiSLEKEEALSLVYDICPQIQ 120
                     689***************************************************8..77777777777777776888899999999********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                     f+h++aN aIlea+ege+ vHi+D++++    +G QW  L++ L +R+++pp ++RiTgvgs      e l+ +g+ L+++A++l+++fef v v
  XP_028070457.1 121 FGHFIANAAILEALEGESSVHIVDLGMTlclrHGHQWRRLMHGLVNRAGQPPrRVRITGVGS----CGEHLRGIGDELERYARTLDLNFEFLV-V 210
                     **************************853333899*************877779********....**************************9.7 PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                     +++le+l+ +e+ v+  E+l++n++lqlh +++es    +   +vL+++ +l+Pk +v+veq+++hn++ Fl rf+eal+yy+a+fdsl+a lpr
  XP_028070457.1 211 ESNLENLQAKEFGVRGSEVLVINSILQLHCVVKESRGALN---SVLQTMHELNPKALVLVEQDSSHNGPFFLGRFMEALHYYAAIFDSLDAMLPR 302
                     9*******************************88877777...8*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                      +  r+k+E++++++ei+n+v+ceg +r+erh +l +Wr+r+++aGF+p p++  + +qak  l +++  +gy+v ee+g+lvlgWk++p+v++S
  XP_028070457.1 303 YDTRRVKMEQFFFAEEIKNIVSCEGPARVERHDRLDQWRRRMSRAGFQPSPIK--MLSQAKQWLGEINfCEGYTVVEEKGCLVLGWKSKPIVAAS 395
                     ***************************************************96..79************************************** PP

            GRAS 372 aWr 374
                     +W+
  XP_028070457.1 396 CWK 398
                     **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MNEAAKALVN DEGDDHVKEE VTGDGVRLVQ LLLACAEAVA CRDKSHASAL LSELRSEALV  60
FGTSFQRVAS CFVQGLSDRL ALVHLLRGIV PAATPPKNMA ISLEKEEALS LVYDICPQIQ  120
FGHFIANAAI LEALEGESSV HIVDLGMTLC LRHGHQWRRL MHGLVNRAGQ PPRRVRITGV  180
GSCGEHLRGI GDELERYART LDLNFEFLVV ESNLENLQAK EFGVRGSEVL VINSILQLHC  240
VVKESRGALN SVLQTMHELN PKALVLVEQD SSHNGPFFLG RFMEALHYYA AIFDSLDAML  300
PRYDTRRVKM EQFFFAEEIK NIVSCEGPAR VERHDRLDQW RRRMSRAGFQ PSPIKMLSQA  360
KQWLGEINFC EGYTVVEEKG CLVLGWKSKP IVAASCWKCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-75GRAS family protein