PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069174.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SRS

Protein Properties

Length: 346aa MW: 37572.3 Da PI: 6.9757

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	228.7	1e-70	115	277	3	155
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa............aeaaskrkrelkskkqsa 85 g++sCqdCGnqakk+C+h+RCRtCCksrgf+C+thvkstWvpaakrrer qqla++++++++++ +++++kr re+ +++s+ XP_028069174.1 115 GGNISCQDCGNQAKKGCEHMRCRTCCKSRGFECQTHVKSTWVPAAKRRERLQQLASLHQQQQQQQheeekeeqlvelHRENTKRLREN-PNASSS 208 5789*************************************************999888877756676666665555555555554.455555 PP DUF702 86 lsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155 l +t+ ++ + +e+ ++P+ev+s+avfrcvrvss+dd+++++aYqtav+igGhvfkGiLydqG+e++ XP_028069174.1 209 LVCTT-RLPTNASGFEVGNFPAEVNSPAVFRCVRVSSIDDADDQYAYQTAVNIGGHVFKGILYDQGPENQ 277 55444.3344556899999**********************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAGFFSLGYG RGTNNNNNNN QQGNNNNPPN EFSPESLFLY KNEDVSYKPF QLWQQHQPQP 60 QHQHQHHTHS SLQDLYSSAG GLAIGPSRRE TNIAAADESP RSGLVMMMGG GGGGGGNISC 120 QDCGNQAKKG CEHMRCRTCC KSRGFECQTH VKSTWVPAAK RRERLQQLAS LHQQQQQQQH 180 EEEKEEQLVE LHRENTKRLR ENPNASSSLV CTTRLPTNAS GFEVGNFPAE VNSPAVFRCV 240 RVSSIDDADD QYAYQTAVNI GGHVFKGILY DQGPENQYMT GESSSGTGGG LNLITAATAT 300 SAVTTTAGGG SAAAGSPTVA FLDPFLYPPP LTTFMSGTQF FPHSRS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAGFFSLGYG RGTNNNNNNN QQGNNNNPPN EFSPESLFLY KNEDVSYKPF QLWQQHQPQP  60
QHQHQHHTHS SLQDLYSSAG GLAIGPSRRE TNIAAADESP RSGLVMMMGG GGGGGGNISC  120
QDCGNQAKKG CEHMRCRTCC KSRGFECQTH VKSTWVPAAK RRERLQQLAS LHQQQQQQQH  180
EEEKEEQLVE LHRENTKRLR ENPNASSSLV CTTRLPTNAS GFEVGNFPAE VNSPAVFRCV  240
RVSSIDDADD QYAYQTAVNI GGHVFKGILY DQGPENQYMT GESSSGTGGG LNLITAATAT  300
SAVTTTAGGG SAAAGSPTVA FLDPFLYPPP LTTFMSGTQF FPHSRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	2e-63	SRS family protein