PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 28544.6 Da PI: 8.4732 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.7 | 3.2e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+ +++++G +W+ a+ g+ R++k+c++rw +yl XP_028068926.1 14 KGIWSPEEDQKLITYIRRHGIWNWSEMAKPAGLLRSGKSCRLRWVNYL 61 678*****************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E+e +++ +++lG++ W++Ia+ ++ gRt++++k++w+++l XP_028068926.1 67 RGNFTRGEEETILKMHEKLGNK-WSAIAAALP-GRTDNEVKNYWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MVRTRRCEKT GLKKGIWSPE EDQKLITYIR RHGIWNWSEM AKPAGLLRSG KSCRLRWVNY 60 LRPDLKRGNF TRGEEETILK MHEKLGNKWS AIAAALPGRT DNEVKNYWHT HLKKRLHKPA 120 QLKTSKAESN QNNLPELNLL LPNPPEASSS SDGSRNIPAL LPSTTGPAIG NVEAYIGSQT 180 CIELQSLSEM EKLYMENLQG TLVDPGFILP HSELWCLDPA SLYCFENDAN SDLLFNLSLP 240 GEIGGIKEPN VHF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-56 | MYB family protein |