PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068395.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 287aa    MW: 32569.8 Da    PI: 6.5715
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.42.9e-0698120123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C  Cgk F+r  nL+ Hi tH
  XP_028068395.1  98 HCCDLCGKEFKRYANLRIHILTH 120
                     5699*****************99 PP
2zf-C2H210.90.0015174197123
                     EEETTTT.EEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
                     y+C+ C+ ksFs   +Lk+H + +
  XP_028068395.1 174 YSCTRCNrKSFSVLADLKSHFKHC 197
                     99******************8866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MESLKRFLSD SINNNTLLTK HQSEMVSDEI SSAVDQVIIN GAALLATQPE EIASDLNFLE  60
NHTMNINGGY KTREAIESDD PWEIIEFSSA QLLGARKHCC DLCGKEFKRY ANLRIHILTH  120
ENQSKSSELW KKRARFSCPF IGCERNQLNE KFRPLKSVVC AKNHYRRSHC PKMYSCTRCN  180
RKSFSVLADL KSHFKHCGES RFRCSCGTSF LRRDKLVGHM TLFEGHVPAA MEEDEKAKGE  240
VVMVGDEEDE DQMGSCSENR FLEGAFGEFD SIEKYCLQGA LGDSSNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.15e-56C2H2 family protein