PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067857.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 583aa    MW: 64467.9 Da    PI: 5.4397
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4623.4e-1412145811374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAea+++++l+la+al++++  la +++ +m+++a+yf+eALa+r++r        l p++++++  s+ l++   f+e++P+lkf+h
  XP_028067857.1 214 LVHALMACAEAIQQDNLKLAEALVKQIGLLAVSQAGAMRKVATYFAEALARRIYR--------LYPQNSQDNAFSDLLQM--HFYETCPYLKFAH 298
                     689****************************************************........56777766666666555..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p+ ++++ l+e+g++La++Ae+++v+fe++ +va++l+dl+
  XP_028067857.1 299 FTANQAILEAFANHRRVHVIDFSMKQGMQWPALMQALALRPGGPPTFRLTGIGPPSDDNTDHLQEVGWKLAQLAETIHVKFEYRGFVANSLADLD 393
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak.......lpre 278
                      ++L++++gEa+aVn+v+qlh+ll++++s+e+    vL++vk+++P++++vveqeadhn++ Fl+rf+e+l+yys+lfdsle         l++ 
  XP_028067857.1 394 ASMLDLREGEAVAVNSVFQLHQLLARPGSIEK----VLSAVKEMKPEILTVVEQEADHNGPVFLDRFTESLHYYSTLFDSLEGCgggggesLSSV 484
                     ********************************....*********************************************98778888889999 PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     s++++++++++lgr+i+nvv ceg +r+erhetl+kWr+r+ ++GF+pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++Sa
  XP_028067857.1 485 SNQDKVMSEVYLGRQICNVVPCEGPDRIERHETLAKWRARFVSSGFEPVHLGSNAFKQASMLLALFNgGDGYRVEENDGCLMLGWHTRPLIATSA 579
                     9********************************************************************************************** PP

            GRAS 373 Wr 374
                     W+
  XP_028067857.1 580 WK 581
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    
MKRDLHNPPP PPPYKDTFCG GCGYSTEEAS GKSKMWEEQD AGMDELLAVL GYKVKASDMS  60
EVAQKLEQLE EVMGHAQEDG LSHLASETVH YNPSDLSSWL ESMISELHPL PNFDSSLPPP  120
SAFDSRRHPL NHRIFHDSFS DDYDLKAIAG KAVYPEIQQP NKRLKPSSAS SSSTVSSIPV  180
GIWTLPLPLP DNDSSTASTR PLILVDSQEN GIRLVHALMA CAEAIQQDNL KLAEALVKQI  240
GLLAVSQAGA MRKVATYFAE ALARRIYRLY PQNSQDNAFS DLLQMHFYET CPYLKFAHFT  300
ANQAILEAFA NHRRVHVIDF SMKQGMQWPA LMQALALRPG GPPTFRLTGI GPPSDDNTDH  360
LQEVGWKLAQ LAETIHVKFE YRGFVANSLA DLDASMLDLR EGEAVAVNSV FQLHQLLARP  420
GSIEKVLSAV KEMKPEILTV VEQEADHNGP VFLDRFTESL HYYSTLFDSL EGCGGGGGES  480
LSSVSNQDKV MSEVYLGRQI CNVVPCEGPD RIERHETLAK WRARFVSSGF EPVHLGSNAF  540
KQASMLLALF NGGDGYRVEE NDGCLMLGWH TRPLIATSAW KLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein