PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028066362.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 206aa MW: 22319.3 Da PI: 8.1124 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 116.1 | 4.5e-36 | 35 | 113 | 6 | 83 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas 83 ++ +++hTkv+gR+RR+R++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++++a+ + ++ s s++ XP_028066362.1 35 SSLKDRHTKVNGRGRRIRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTTPAEPFsTPTSTIPSSQ 113 6679********************************************************9999866644444444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MSSEMLHRNF SSQNHISTTA AAAELVPTRK GGGSSSLKDR HTKVNGRGRR IRMPALCAAR 60 IFQLTRELGH RSDGETIEWL LRQAEPSIIA ATGTGTTPAE PFSTPTSTIP SSQRSVFASL 120 SPSYSRVPAP ATPLTASMSG SRHIIMPGML VAPPSCRVDL CRAASPAMGM EFTGDEFYRN 180 MPFTALLMQP ESDEAEERHN EEIFGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47620.1 | 6e-29 | TCP family protein |