PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065947.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 763aa    MW: 87610.3 Da    PI: 8.3682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.12.2e-2143117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fYn YA ++GF++r+ + ++s+ +g++++r+fvCskeg++++              +rtgC a ++v+k+++gkw+++++++eHnHel
  XP_028065947.1  43 EFYNLYAAQAGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKSDSGKWVLANIKKEHNHEL 117
                     6***************************************987..............589***************************98 PP
2FAR168.41.7e-21196271190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY++YA ++GF+vr+ +  +sk++g+it+r+fvCskeg++++              +r+gC a ++++++++g+w+v++l++eHnH+l 
  XP_028065947.1 196 KFYHAYAASTGFKVRIGQLFRSKHDGSITSRRFVCSKEGRQHP--------------SRVGCSAFMRIQRQESGRWVVDRLQKEHNHDLD 271
                     6**************************************9988..............4899**************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 763 aa     Download sequence    
MTVRAKPVGA LLLKNNGRRE DEGESKLEPH VGLEFDSAED AQEFYNLYAA QAGFKIRIGQ  60
LYRSRVDGSV ISRRFVCSKE GFQTNSRTGC PAFIRVQKSD SGKWVLANIK KEHNHELGLP  120
GEIRPPHIQR KAHPAPRSSV VVSTRTGIRS LEEEDGRPSP SEAMDVKRFK REEVEGVPKV  180
EPYKGLEFSS ANEAYKFYHA YAASTGFKVR IGQLFRSKHD GSITSRRFVC SKEGRQHPSR  240
VGCSAFMRIQ RQESGRWVVD RLQKEHNHDL DSPMDASRLI ATGPKGFKEE VSCGLENLDL  300
VETNGGLNLV KRGRQCNIGS DWYPVLLDYF QSRQAEDTGF FYAVEVDDGK SMSIFWADGR  360
SRFSCSQFGD AIVFDTAYRS SSYLVPYASF IGINHHRQPV LLGCALIADE SEESFTWVFQ  420
TWLRAMSGRR PLSIIADQDK AIQHSIAQVF PGTHHRFSTW QIKAKEQRYL GSLLSMDTEF  480
KYEYETCICQ SQTPNEFDSA WNVLLNKFDL KENAWLKEMY RMRKSWVPLY IRGTFFAGIP  540
MDGSMKSFFG TFLNAQTPLN EFVIRYEKAL EQRREEERKE DFNSFNMQAV LHTKDPIEEQ  600
GRRLYTITMF KAFQKEVLEC YSYVGIKINV EGAISRYMVQ NCGDGDERNT VAFNASNLNV  660
SCSCKMFEFE GMLCRHALKV FQIMNIRELP SRYILHRWTK NAKYGILRDV DSGGGSQDFR  720
ALMLWSLREE ACNYIEAGTT SLERYKLAFE IMQEGRRNLC WQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1 family protein