PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065943.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 779aa MW: 89530.5 Da PI: 8.3345

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.1	2.2e-21	59	133	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn YA ++GF++r+ + ++s+ +g++++r+fvCskeg++++ +rtgC a ++v+k+++gkw+++++++eHnHel XP_028065943.1 59 EFYNLYAAQAGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKSDSGKWVLANIKKEHNHEL 133 6*************************************987..............589*************************98 PP
2	FAR1	68.4	1.8e-21	212	287	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY++YA ++GF+vr+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++++g+w+v++l++eHnH+l XP_028065943.1 212 KFYHAYAASTGFKVRIGQLFRSKHDGSITSRRFVCSKEGRQHP--------------SRVGCSAFMRIQRQESGRWVVDRLQKEHNHDLD 287 6************************************9988..............4899************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MLCSNTNMNR EELRNIMTVR AKPVGALLLK NNGRREDEGE SKLEPHVGLE FDSAEDAQEF 60 YNLYAAQAGF KIRIGQLYRS RVDGSVISRR FVCSKEGFQT NSRTGCPAFI RVQKSDSGKW 120 VLANIKKEHN HELGLPGEIR PPHIQRKAHP APRSSVVVST RTGIRSLEEE DGRPSPSEAM 180 DVKRFKREEV EGVPKVEPYK GLEFSSANEA YKFYHAYAAS TGFKVRIGQL FRSKHDGSIT 240 SRRFVCSKEG RQHPSRVGCS AFMRIQRQES GRWVVDRLQK EHNHDLDSPM DASRLIATGP 300 KGFKEEVSCG LENLDLVETN GGLNLVKRGR QCNIGSDWYP VLLDYFQSRQ AEDTGFFYAV 360 EVDDGKSMSI FWADGRSRFS CSQFGDAIVF DTAYRSSSYL VPYASFIGIN HHRQPVLLGC 420 ALIADESEES FTWVFQTWLR AMSGRRPLSI IADQDKAIQH SIAQVFPGTH HRFSTWQIKA 480 KEQRYLGSLL SMDTEFKYEY ETCICQSQTP NEFDSAWNVL LNKFDLKENA WLKEMYRMRK 540 SWVPLYIRGT FFAGIPMDGS MKSFFGTFLN AQTPLNEFVI RYEKALEQRR EEERKEDFNS 600 FNMQAVLHTK DPIEEQGRRL YTITMFKAFQ KEVLECYSYV GIKINVEGAI SRYMVQNCGD 660 GDERNTVAFN ASNLNVSCSC KMFEFEGMLC RHALKVFQIM NIRELPSRYI LHRWTKNAKY 720 GILRDVDSGG GSQDFRALML WSLREEACNY IEAGTTSLER YKLAFEIMQE GRRNLCWQN

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MLCSNTNMNR EELRNIMTVR AKPVGALLLK NNGRREDEGE SKLEPHVGLE FDSAEDAQEF  60
YNLYAAQAGF KIRIGQLYRS RVDGSVISRR FVCSKEGFQT NSRTGCPAFI RVQKSDSGKW  120
VLANIKKEHN HELGLPGEIR PPHIQRKAHP APRSSVVVST RTGIRSLEEE DGRPSPSEAM  180
DVKRFKREEV EGVPKVEPYK GLEFSSANEA YKFYHAYAAS TGFKVRIGQL FRSKHDGSIT  240
SRRFVCSKEG RQHPSRVGCS AFMRIQRQES GRWVVDRLQK EHNHDLDSPM DASRLIATGP  300
KGFKEEVSCG LENLDLVETN GGLNLVKRGR QCNIGSDWYP VLLDYFQSRQ AEDTGFFYAV  360
EVDDGKSMSI FWADGRSRFS CSQFGDAIVF DTAYRSSSYL VPYASFIGIN HHRQPVLLGC  420
ALIADESEES FTWVFQTWLR AMSGRRPLSI IADQDKAIQH SIAQVFPGTH HRFSTWQIKA  480
KEQRYLGSLL SMDTEFKYEY ETCICQSQTP NEFDSAWNVL LNKFDLKENA WLKEMYRMRK  540
SWVPLYIRGT FFAGIPMDGS MKSFFGTFLN AQTPLNEFVI RYEKALEQRR EEERKEDFNS  600
FNMQAVLHTK DPIEEQGRRL YTITMFKAFQ KEVLECYSYV GIKINVEGAI SRYMVQNCGD  660
GDERNTVAFN ASNLNVSCSC KMFEFEGMLC RHALKVFQIM NIRELPSRYI LHRWTKNAKY  720
GILRDVDSGG GSQDFRALML WSLREEACNY IEAGTTSLER YKLAFEIMQE GRRNLCWQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein