PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WOX | ||||||||
Protein Properties | Length: 205aa MW: 23177.2 Da PI: 9.8977 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.5 | 4.1e-22 | 90 | 149 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+++t++ql++Lee++e r+psa++++++A+kl +++ ++V++WFqN++a+e++ XP_028065807.1 90 ARWNPTPDQLRALEEMYEGgIRTPSADQIQQIAAKLrqygKIEGKNVFYWFQNHKARERQ 149 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 116.1 | 1.7e-37 | 89 | 151 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Ptp+Q++ Lee+y+ G+rtP++++iq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_028065807.1 89 SARWNPTPDQLRALEEMYEGGIRTPSADQIQQIAAKLRQYGKIEGKNVFYWFQNHKARERQKR 151 68***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MWMMGCSSDC CSSKFNFNFN RSESDSINSR KLRPLIPKPT TNTTFSAMPN PSSYCTCLHK 60 TNLFSLNDQM ATMKEQSKAD INTTVALVSA RWNPTPDQLR ALEEMYEGGI RTPSADQIQQ 120 IAAKLRQYGK IEGKNVFYWF QNHKARERQK RRRILDSLSQ GLSKTGFEVA HAKNKATSSN 180 SSTLSEHKFN SLVTDPLLPT ESQPI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 150 | 154 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 6e-43 | WOX family protein |