PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065535.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 32536.6 Da PI: 7.7391 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.2 | 1.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ lvd+++ +G +tW++ ++ g+ R++k+c++rw +yl XP_028065535.1 14 RGAWTPEEDKVLVDYITTHGHPTWRSLPKLAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.4e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ XP_028065535.1 67 RGPFTPEEENRIIQLHGMLGNK-WAAIASHLP-GRTDNEVKNFWNSN 111 89********************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MGRAPCCDKE AVKRGAWTPE EDKVLVDYIT THGHPTWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIIRGPF TPEEENRIIQ LHGMLGNKWA AIASHLPGRT DNEVKNFWNS NLKKRFFCIS 120 GLNLQASKPP SASISINTKP EPLSTRHMAQ WESARVEAEA RLSMNSLLSP SQTVKTDSDY 180 FLRLWNSEVG ESFRSLNGRR ESQSPISQTS SSTKVGSGSG VTMQAGPSRT SSPIEQKCIC 240 ANDMMGGSEC SNSYELDDSS NSAMNLLLDF PSGDDDMGFL QGQPDDVSIF FRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 2e-99 | MYB family protein |