PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064337.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 675aa MW: 74024 Da PI: 6.2391

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79	5.7e-25	215	264	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ XP_028064337.1 215 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQ 264 79*****************.**************************9 PP
2	Myb_DNA-binding	36.6	1.1e-11	217	264	1	45
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++q XP_028064337.1 217 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQ 264 678*******************************************98 PP
3	Response_reg	74.7	3.4e-25	36	144	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l++ y ev+ + +e+al ll+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + G XP_028064337.1 36 VLVVDDDSTCLMILEKMLRNCLY-EVTKCNRAEKALSLLRENRngYDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKSVVMKGVTHG 128 89*******************.***********99999*******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l++ XP_028064337.1 129 ACDYLIKPVRIEALRN 144 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MNLGGQGARS MSVPSYSVSW KPGDAVSDQF PVGLRVLVVD DDSTCLMILE KMLRNCLYEV 60 TKCNRAEKAL SLLRENRNGY DIVISDVHMP DMDGFKLLEH VGLEMDLPVI MMSADDSKSV 120 VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKRKNEWKDF EQSGSIDEGE QQQQKLSEDA 180 DFSSSANEGS WRNAKRRKDE EDEVEERDDT SSSKKPRVVW SVELHQQFVA AVNQLGIDKA 240 VPKKILELMN VPGLTRENVA SHLQLPLWST HNCNNLVQKY RLYLRRLSGV SHHQSGLNNS 300 FVGPADATFG PISSFNGLDF QALAATGQIP AQSLASLQAA ALGRSTAKSG ISVPLIDQRN 360 LFSFEMPKRF ETPQPSNNNK QINLLHGIPT TMEPKQLANL HQSVQSFRGM NNMQTNPHGS 420 QSSSLLVQMS QPHSRPQMLN DTNANHLLRL PSSIAPPALS TGMTSGVLVS IAPPALSTGM 480 TSGVFSRNGI ADNARGTVYN SVSQPSSMVD FSIDRNTDLP RNGFLLGNNS GMSGITSKAA 540 LQEEGNSGMK GSRGFAPSYD IFSDLHQHKS QDWELQSLGL NFDTSQHVNM QGNIDVPPSV 600 FVDQSFSSCQ NNAHNRNTSI GKGIFSVGED SGNGTIEQYS QEDLMSALLK QQQEGIGPAS 660 NEFGFDGYSL DNLPV

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MNLGGQGARS MSVPSYSVSW KPGDAVSDQF PVGLRVLVVD DDSTCLMILE KMLRNCLYEV  60
TKCNRAEKAL SLLRENRNGY DIVISDVHMP DMDGFKLLEH VGLEMDLPVI MMSADDSKSV  120
VMKGVTHGAC DYLIKPVRIE ALRNIWQHVV RKRKNEWKDF EQSGSIDEGE QQQQKLSEDA  180
DFSSSANEGS WRNAKRRKDE EDEVEERDDT SSSKKPRVVW SVELHQQFVA AVNQLGIDKA  240
VPKKILELMN VPGLTRENVA SHLQLPLWST HNCNNLVQKY RLYLRRLSGV SHHQSGLNNS  300
FVGPADATFG PISSFNGLDF QALAATGQIP AQSLASLQAA ALGRSTAKSG ISVPLIDQRN  360
LFSFEMPKRF ETPQPSNNNK QINLLHGIPT TMEPKQLANL HQSVQSFRGM NNMQTNPHGS  420
QSSSLLVQMS QPHSRPQMLN DTNANHLLRL PSSIAPPALS TGMTSGVLVS IAPPALSTGM  480
TSGVFSRNGI ADNARGTVYN SVSQPSSMVD FSIDRNTDLP RNGFLLGNNS GMSGITSKAA  540
LQEEGNSGMK GSRGFAPSYD IFSDLHQHKS QDWELQSLGL NFDTSQHVNM QGNIDVPPSV  600
FVDQSFSSCQ NNAHNRNTSI GKGIFSVGED SGNGTIEQYS QEDLMSALLK QQQEGIGPAS  660
NEFGFDGYSL DNLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-178	ARR-B family protein