PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063607.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 293aa    MW: 32491.1 Da    PI: 6.5998
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-05426123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ykC+ C+k F +   L  H+r+H
  XP_028063607.1  4 YKCKLCSKAFANGRALGGHMRSH 26
                    9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MERYKCKLCS KAFANGRALG GHMRSHLANL PIPPKTQKPQ QLSEPTESAS SLSSSSEEEQ  60
VREGSEEKAL VYGLRENPKR SFRLVDPKFL DGGSVVQDRE SETESSRNPT RRRSKRTRKS  120
PKLKKPSSIE SVTELEQVSS VSDTSTEEDV ALCLMMLSRD TWSSDDSGEL RPPSQRKYQC  180
ETCKKEFGSF QALGGHRTSH TKVVKSCIAD NVDQNQKVHE CPVCFKVFGS GQALGGHKRS  240
HLLSSSKSAS KFGESLIDLN LPAPMEDEGD DDDDDEHSQL EISAVSDAEF IKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.11e-33C2H2 family protein