PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028063392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 172aa MW: 19842.5 Da PI: 10.694 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 118.5 | 8.5e-37 | 87 | 153 | 2 | 68 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtsss 68 gk+drhski+T+ g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k+ai eltg+ + XP_028063392.1 87 SGKTDRHSKIYTANGPRDRRMRLSVQIARKFFDLQDMLGFDKASKTIEWLFSNSKAAIRELTGNLPQ 153 689***********************************************************99433 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MFRQSGTNEA SPNSRQEDPT FLFLHFPSPF LDNSDPLFVP QQDEIIDSHR TDREIHMEGS 60 KKPPRFCLKR KKRTDDGAKN PNPRKRSGKT DRHSKIYTAN GPRDRRMRLS VQIARKFFDL 120 QDMLGFDKAS KTIEWLFSNS KAAIRELTGN LPQLNYNCGR HGKAERVVLV GV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 89 | KRKKRTDDGAKNPNPRKRSGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 1e-29 | TCP family protein |