PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028063348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB_related | ||||||||
Protein Properties | Length: 75aa MW: 8531.18 Da PI: 4.0944 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.9 | 3.7e-11 | 26 | 69 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++ ++++E+ l+ + ++ G + W++Ia +++ gRt++++ +w++ XP_028063348.1 26 KLEFSEDEETLITRMYNLVGER-WSLIAGRIP-GRTAEEIEKYWNS 69 678*******************.*********.***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence |
MADLEHSTSD DASVDSRAED PSQDSKLEFS EDEETLITRM YNLVGERWSL IAGRIPGRTA 60 EEIEKYWNSR YSTSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 1e-18 | MYB_related family protein |