PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063309.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 520aa    MW: 57571.9 Da    PI: 6.0361
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.21.1e-1121515191374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lL++cAeav+ +d++ a+ lL++l+  a   g+++qR+a++f+++La rla  v+ l    p+ +  +  s+++  al+l +e++P ++f+h
  XP_028063309.1 151 LVQLLISCAEAVACRDKSYASVLLSELRASALVFGSSFQRVASCFVQGLADRLAL-VQPLGFVAPSMSMIDIASAKKEEALHLVYEICPHIQFGH 244
                     689***************************************************8.5555544455555556699999999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                     ++aN++Ilea+ege+ vH++D++++    +G QW  L+q+La+R++  p +lRiTgvg      +++ + +g+ L+ +A++lg+++ef+v v+++
  XP_028063309.1 245 FVANSTILEAFEGENNVHVVDLGMTvglpHGYQWRRLIQSLANRAGLRPaRLRITGVGL----YTDRFQIIGDELEAYAHSLGINLEFSV-VESN 334
                     **********************9874444788*************66555*********....99************************9.7*** PP

            GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                     le+l++e+ + ++gE l+Vn++lqlh +++es    +   +vL+++ +lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ + 
  XP_028063309.1 335 LENLKPEDVKPREGEILVVNSILQLHCVVKESRGALN---SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDT 426
                     *****************************88877777...8****************************************************** PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+p+p++  +++qak  l k+k  dg+++ ee+g+lvlgWk++p+v++S+W+
  XP_028063309.1 427 RRAKMEQFFFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQPAPIK--MVAQAKQWLGKIKaCDGHTIVEEKGCLVLGWKSKPIVAASCWK 519
                     ************************************************96..688***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MAQSVLSYEL CNDQERIDDQ MSGLELSLSA MACYPFPYMP ILENPAVPTW FPTVSDETGI  60
HKRLKGTSSV PESIESNSSF YCGGGGGSNM SRNSSTSSLN SLPRLQFRDH IWTYTQRYLA  120
AEAVEEAAAA IIGSEDGKSE EAEGAGDGMR LVQLLISCAE AVACRDKSYA SVLLSELRAS  180
ALVFGSSFQR VASCFVQGLA DRLALVQPLG FVAPSMSMID IASAKKEEAL HLVYEICPHI  240
QFGHFVANST ILEAFEGENN VHVVDLGMTV GLPHGYQWRR LIQSLANRAG LRPARLRITG  300
VGLYTDRFQI IGDELEAYAH SLGINLEFSV VESNLENLKP EDVKPREGEI LVVNSILQLH  360
CVVKESRGAL NSVLQIIHEL SPKVLVLVEQ DSSHNGPFFL GRFMEALHYY SAIFDSLDAM  420
LPKYDTRRAK MEQFFFAEEI KNIVSCEGPA RVERHERVDQ WRRRMSRAGF QPAPIKMVAQ  480
AKQWLGKIKA CDGHTIVEEK GCLVLGWKSK PIVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.17e-83GRAS family protein